Yes, and it is worth noting that you cannot stop someone from paying this way. If someone sends you a transaction containing 100x 546 sat outputs what are you going to do? Call the police, say you've been robbed? No. If they owe you 54,600 sats for something and then they pay it to you in this method, you cannot legitimately claim to have been ripped off. You might say "But I don't want to pay the fees to move those utxos!" And that's fine, but "paying to move utxos" is the system you opted into when you started using bitcoin.

If you received 54,600 sats from someone who owed you 54,600 sats, then you were paid fair and square, unless you have a policy where the customer also has to pay extra to compensate your mining fees for you, or a separate contract that says "and you must agree to pay with utxos exceeding size X or the debt remains unpaid." You can refuse to do any more business with the mean customer, but he paid off his debt. Because 1 sat = 1 sat.